Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Virion morphogenesis family protein | ALQ31_01705 | Not Available | Positive | 5711603 - 5712271 | 25193.5 |
| Putative tail sheath protein | ALQ31_01706 | Not Available | Positive | 5712286 - 5713398 | 39182.2 |
| Putative tail tube protein | ALQ31_01707 | Not Available | Positive | 5713402 - 5713854 | 15887.8 |
| Dksa/trar family c4-type zinc finger protein | ALQ31_01708 | Not Available | Positive | 5713854 - 5714066 | 7748.38 |
| hypothetical protein | ALQ31_01709 | Not Available | Positive | 5714063 - 5714269 | 7370.15 |
| Endolysin | ALQ31_01710 | Not Available | Positive | 5714266 - 5714793 | 18525.3 |
| Lysis protein | ALQ31_01711 | Not Available | Positive | 5714790 - 5715278 | 17666.1 |
| Hypothetical protein | ALQ31_01712 | Not Available | Positive | 5715312 - 5715602 | 10622.8 |
| Tail assembly chaperone | ALQ31_01713 | Not Available | Positive | 5715623 - 5715766 | 5287.32 |
| Tail tape measure protein | ALQ31_01714 | Not Available | Positive | 5715772 - 5718036 | 79500.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








