Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ31_01695 | Not Available | Positive | 5704017 - 5704193 | 6638.93 |
| Hypothetical protein | ALQ31_01696 | Not Available | Negative | 5704235 - 5704495 | 9893.92 |
| Portal protein | ALQ31_01697 | Not Available | Negative | 5704571 - 5705323 | 28219.5 |
| Putative terminase atpase subunit | ALQ31_01698 | Not Available | Negative | 5705349 - 5707403 | 77841.0 |
| Gpo family capsid scaffolding protein | ALQ31_01699 | Not Available | Positive | 5707565 - 5708497 | 33477.6 |
| Major capsid protein | ALQ31_01700 | Not Available | Positive | 5708499 - 5709521 | 37514.3 |
| Putative terminase endonuclease subunit | ALQ31_01701 | Not Available | Positive | 5709518 - 5710240 | 27251.4 |
| hypothetical protein | ALQ31_01702 | Not Available | Negative | 5710380 - 5710676 | 10942.4 |
| Putative head completion/stabilization protein | ALQ31_05613 | Not Available | Positive | 5710697 - 5711173 | 17498.9 |
| Putative tail protein | ALQ31_01704 | Not Available | Positive | 5711170 - 5711613 | 16510.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








