Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 5697256 - 5697268 | Not Available |
| Integrase | ALQ31_01686 | Not Available | Negative | 5697333 - 5698481 | 43436.3 |
| Duf4224 domain-containing protein | ALQ31_01687 | Not Available | Negative | 5698478 - 5698690 | 7948.38 |
| hypothetical protein | ALQ31_01688 | Not Available | Negative | 5698767 - 5699000 | 8230.79 |
| putative prophage pssb64-01, orf4 | ALQ31_01689 | Not Available | Negative | 5699091 - 5699387 | 11124.3 |
| Toprim domain-containing protein | ALQ31_01690 | Not Available | Negative | 5699412 - 5702105 | 102542.0 |
| Hypothetical protein | ALQ31_01691 | Not Available | Negative | 5702102 - 5702341 | 8935.82 |
| hypothetical protein | ALQ31_01692 | Not Available | Negative | 5702412 - 5702774 | 13311.8 |
| Hypothetical protein | ALQ31_01693 | Not Available | Negative | 5702771 - 5703280 | 18415.9 |
| Dna-binding protein | ALQ31_01694 | Not Available | Negative | 5703280 - 5703480 | 7256.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








