Pseudomonas amygdali pv. morsprunorum strain ICMP 3897

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. morsprunorum strain ICMP 3897 is a Gram-negative, rod-shaped bacterium known for its mobility. This strain is particularly notable for its pathogenicity, as it is associated with canker disease and bacterial canker in host plants, specifically within the genus Prunus, including Prunus avium. The bacterium has a single replicon, which is relevant for its genetic stability and replication within host environments. Given its mobility, P. amygdali pv. morsprunorum strain ICMP 3897 can effectively spread within its host plants, facilitating infection and disease progression. This mobility is a critical factor in the epidemiology of bacterial canker, as it allows the pathogen to colonize new tissues and potentially infect neighboring plants. Understanding the characteristics of this strain is essential for managing the diseases it causes. The association with Prunus species, particularly Prunus avium, highlights the importance of monitoring and controlling this pathogen in agricultural settings where these trees are cultivated. Effective disease management strategies could mitigate the impact of bacterial canker, thereby protecting crop yields and maintaining the health of Prunus populations. The strain's accession number, RBQD00000000.1, provides a reference for further research and characterization, facilitating ongoing studies into its biology and ecology within the context of plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. morsprunorum strain ICMP 3897

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. morsprunorum strain ICMP 3897
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Prunus, Prunus avium
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. morsprunorum strain ICMP 3897

Gene Summary

Adenine Count

1265154 bp

Thymine Count

1266662 bp

Guanine Count

1758869 bp

Cytosine Count

1755394 bp

Genome Length

6062753 bp

Protein-coding Genes

5637 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail assembly chaperoneALQ31_00301Not AvailablePositive2584272 - 258470915231.1
Tail protein gpt-like proteinALQ31_00302Not AvailablePositive2584766 - 25849125599.76
Tail tape measure proteinALQ31_00303Not AvailablePositive2585702 - 258827288555.9
Minor tail protein mALQ31_00304Not AvailablePositive2588272 - 258857711181.9
hypothetical proteinALQ31_00305Not AvailableNegative2588770 - 25890278993.6
AttrNot AvailableNot AvailablePositive2589266 - 2589277Not Available
Gp18, phage minor tail protein lALQ31_00306Not AvailablePositive2589521 - 259021925773.5
Phage tail assembly proteinALQ31_00307Not AvailablePositive2590222 - 259100429172.5
Tail assembly proteinALQ31_00308Not AvailablePositive2591001 - 259158820272.3
Central tail fiberALQ31_00309Not AvailablePositive2591643 - 2595263130309.0

Displaying genes 91 – 100 of 5838 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Canker diseaseCausesPMC3723570
Bacterial cankerCausesPMC10747947
Bacterial cankerCausesPMC9343901

Displaying health effects 1 – 3 of 3 in total