Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein comea-like protein | ALQ54_03801 | Not Available | Positive | 958544 - 958906 | 12851.4 |
| tetr family transcriptional regulator | ALQ54_05499 | Not Available | Negative | 959010 - 959624 | 22762.4 |
| hypothetical protein | ALQ54_03803 | Not Available | Negative | 959699 - 960490 | 29064.3 |
| threonine/serine transporter | ALQ54_03804 | Not Available | Positive | 960858 - 962135 | 46160.7 |
| hypothetical protein | ALQ54_03805 | Not Available | Negative | 962208 - 962414 | 8003.46 |
| grea/greb family transcription elongation factor | ALQ54_03806 | Not Available | Negative | 962538 - 963020 | 17681.8 |
| hypothetical protein | ALQ54_03807 | Not Available | Negative | 963024 - 963422 | 15075.0 |
| hypothetical protein | ALQ54_03808 | Not Available | Positive | 963582 - 964718 | 42755.6 |
| elongation factor p | ALQ54_03809 | Not Available | Positive | 964818 - 965387 | 21139.1 |
| organic hydroperoxide resistance protein | ALQ54_03810 | Not Available | Negative | 965490 - 965909 | 14202.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










