Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chorismate mutase i / prephenate dehydratase | ALQ54_03792 | Not Available | Positive | 946118 - 947212 | 40359.6 |
| prephenate dehydrogenase | ALQ54_03793 | Not Available | Positive | 947270 - 948874 | 56578.4 |
| cytidylate kinase | ALQ54_03794 | Not Available | Positive | 948871 - 949560 | 24552.5 |
| 30s ribosomal protein s1 | ALQ54_05498 | Not Available | Positive | 949676 - 951373 | 62543.4 |
| integration host factor subunit beta | ALQ54_03796 | Not Available | Positive | 951695 - 951991 | 11076.3 |
| hypothetical protein | ALQ54_100131 | Not Available | Positive | 952016 - 952258 | 8733.36 |
| putative exonuclease of the beta-lactamase fold involved in rna processing | ALQ54_03797 | Not Available | Positive | 952671 - 954104 | 53095.5 |
| putative udp-glucose 4-epimerase | ALQ54_03798 | Not Available | Positive | 954285 - 955283 | 35679.9 |
| glycosyltransferase wbpl | ALQ54_03799 | Not Available | Positive | 955276 - 956286 | 36182.1 |
| nucleotide sugar epimerase/dehydratase wbpm | ALQ54_03800 | Not Available | Positive | 956388 - 958385 | 73859.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










