Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ54_03783 | Not Available | Positive | 935062 - 935844 | 29860.7 |
| diguanylate cye domain protein | ALQ54_03784 | Not Available | Negative | 935872 - 936816 | 35538.8 |
| putative oxoacyl- reductase | ALQ54_05497 | Not Available | Negative | 937006 - 937746 | 26211.4 |
| phosphoglycolate phosphatase-like protein | ALQ54_03786 | Not Available | Negative | 937759 - 938433 | 24850.9 |
| ubiquinone biosynthesis o-methyltransferase | ALQ54_03787 | Not Available | Negative | 938434 - 939132 | 25923.2 |
| putative n-ethylammeline chlorohydrolase | ALQ54_03788 | Not Available | Negative | 939218 - 940549 | 47970.6 |
| methylthioribose-1-phosphate isomerase | ALQ54_03789 | Not Available | Positive | 940649 - 941746 | 39940.1 |
| dna gyrase subunit a | ALQ54_03790 | Not Available | Positive | 942051 - 944828 | 102369.0 |
| hypothetical protein | ALQ54_100560 | Not Available | Negative | 944928 - 945125 | 7389.8 |
| phosphoserine aminotransferase | ALQ54_03791 | Not Available | Positive | 945027 - 946118 | 40054.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










