Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtw protein | ALQ54_05496 | Not Available | Positive | 924173 - 924772 | 21931.8 |
| eama-like family transporter | ALQ54_03775 | Not Available | Positive | 924875 - 925834 | 34679.9 |
| hypothetical protein | ALQ54_03776 | Not Available | Negative | 925855 - 926469 | 22976.8 |
| fumarate hydratase s ii | ALQ54_03777 | Not Available | Negative | 926462 - 927856 | 49096.8 |
| hypothetical protein | ALQ54_03778 | Not Available | Positive | 928026 - 928553 | 18843.9 |
| bola-like protein | ALQ54_03779 | Not Available | Positive | 928569 - 928862 | 10753.9 |
| hypothetical protein | ALQ54_100012 | Not Available | Positive | 928916 - 929989 | 40445.0 |
| hypothetical protein | ALQ54_03780 | Not Available | Positive | 929993 - 930625 | 22932.3 |
| abc transporter, transmembrane region:abc transporter | ALQ54_03781 | Not Available | Positive | 930618 - 932444 | 66649.4 |
| sensory box/ggdef/eal domain protein | ALQ54_03782 | Not Available | Positive | 932559 - 935030 | 91239.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










