Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | ALQ54_03765 | Not Available | Positive | 913427 - 913948 | 18968.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | ALQ54_03766 | Not Available | Positive | 913945 - 914997 | 36190.9 |
| phosphoglycerate/bisphosphoglycerate mutase | ALQ54_03767 | Not Available | Positive | 914994 - 915566 | 20689.8 |
| cobalamin synthase | ALQ54_03768 | Not Available | Positive | 915568 - 916299 | 25780.9 |
| major facilitator superfamily transporter | ALQ54_03769 | Not Available | Positive | 916398 - 917606 | 42301.0 |
| glutathione peroxidase | ALQ54_03770 | Not Available | Positive | 917784 - 918338 | 20198.5 |
| membrane protein involved in aromatic hydrocarbon degradation | ALQ54_03771 | Not Available | Negative | 918597 - 919880 | 45752.3 |
| hypothetical protein | ALQ54_03772 | Not Available | Negative | 920120 - 920338 | 8070.72 |
| hypothetical protein | ALQ54_03773 | Not Available | Negative | 920820 - 921137 | 11306.4 |
| rmuc-like dna recombination protein | ALQ54_03774 | Not Available | Positive | 921764 - 923242 | 55330.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










