Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein-dependent deacetylase | ALQ54_03755 | Not Available | Positive | 903209 - 903955 | 26973.6 |
| nlpc/p60 family lipoprotein | ALQ54_03756 | Not Available | Positive | 904031 - 904759 | 26277.3 |
| nlpc/p60 family lipoprotein | ALQ54_03757 | Not Available | Positive | 904849 - 905394 | 19194.3 |
| l-sorbosone dehydrogenase | ALQ54_05495 | Not Available | Negative | 905735 - 907066 | 47341.1 |
| cobyrinic acid a,c-diamide adenosyltransferase | ALQ54_03759 | Not Available | Positive | 907416 - 908099 | 25074.3 |
| cobyrinic acid a,c-diamide synthase | ALQ54_03760 | Not Available | Positive | 908125 - 909420 | 46116.8 |
| cobyrinic acid a,c-diamide reductase | ALQ54_03761 | Not Available | Positive | 909417 - 910067 | 24201.5 |
| cobalamin biosynthesis protein cobd | ALQ54_03762 | Not Available | Positive | 910064 - 910972 | 32814.5 |
| l-threonine 3-o-phosphate decarboxylase | ALQ54_03763 | Not Available | Positive | 910965 - 911969 | 37299.7 |
| cobyric acid synthase | ALQ54_03764 | Not Available | Positive | 911966 - 913426 | 52268.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










