Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron reductase protein fhuf | ALQ54_03729 | Not Available | Positive | 875591 - 876298 | 25925.6 |
| 4'-phosphopantetheinyl transferase | ALQ54_05492 | Not Available | Negative | 876299 - 877210 | 33477.6 |
| dienelactone hydrolase protein | ALQ54_03730 | Not Available | Negative | 877271 - 878092 | 29907.9 |
| hypothetical protein | ALQ54_03731 | Not Available | Positive | 878233 - 878583 | 12278.4 |
| response regulator receiver:transcriptional regulatory protein | ALQ54_03732 | Not Available | Positive | 878611 - 879288 | 25357.8 |
| two component sensor histidine kinase phoq | ALQ54_03733 | Not Available | Positive | 879285 - 880631 | 50227.8 |
| c4-dicarboxylate transport protein | ALQ54_03734 | Not Available | Positive | 881025 - 882377 | 47545.5 |
| protein sprt | ALQ54_03735 | Not Available | Negative | 882445 - 882939 | 19404.4 |
| hypothetical protein | ALQ54_101018 | Not Available | Negative | 883012 - 883131 | 4480.36 |
| trna 2-thiocytidine biosynthesis protein ttca | ALQ54_03736 | Not Available | Positive | 883134 - 883958 | 31143.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










