Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ54_200083 | Not Available | Positive | 862903 - 863172 | 10048.2 |
| hypothetical protein | ALQ54_200146 | Not Available | Positive | 863179 - 863778 | 22971.1 |
| Trna-pro | Not Available | Not Available | Positive | 865157 - 865233 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 865329 - 865404 | Not Available |
| amino acid adenylation | ALQ54_03724 | Not Available | Positive | 865405 - 867840 | 88967.8 |
| ribonucleoside-diphosphate reductase subunit beta | ALQ54_03725 | Not Available | Negative | 868101 - 869438 | 50626.4 |
| ribonucleoside-diphosphate reductase | ALQ54_05491 | Not Available | Negative | 869614 - 872691 | 114325.0 |
| hypothetical protein | ALQ54_101735 | Not Available | Positive | 873123 - 873269 | 5406.36 |
| response regulator receiver:transcriptional regulatory protein | ALQ54_03727 | Not Available | Positive | 873242 - 873979 | 27433.0 |
| two-component sensor histidine kinase rstb | ALQ54_03728 | Not Available | Positive | 873984 - 875594 | 59890.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










