Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein f | ALQ54_03977 | Not Available | Positive | 850966 - 853254 | 83888.1 |
| coenzyme pqq synthesis protein b | ALQ54_03978 | Not Available | Positive | 853553 - 854464 | 33382.8 |
| pyrroloquinoline-quinone synthase | ALQ54_03979 | Not Available | Positive | 854473 - 855228 | 29118.4 |
| coenzyme pqq synthesis protein e | ALQ54_03980 | Not Available | Positive | 855502 - 856671 | 44077.6 |
| peptidase s9, prolyl oligopeptidase active site region | ALQ54_100077 | Not Available | Positive | 856634 - 858460 | 66829.8 |
| hypothetical protein | ALQ54_03981 | Not Available | Negative | 858516 - 858677 | 5912.75 |
| hypothetical protein | ALQ54_101533 | Not Available | Negative | 858717 - 858998 | 9990.03 |
| acyl-coa dehydrogenase | ALQ54_03982 | Not Available | Negative | 859081 - 860859 | 64339.8 |
| diguanylate cyclase domain protein | ALQ54_05571 | Not Available | Negative | 861029 - 862327 | 48310.9 |
| hypothetical protein | ALQ54_05573 | Not Available | Negative | 862538 - 862722 | 6571.99 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










