Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidase | ALQ54_00831 | Not Available | Negative | 830909 - 832093 | 41589.7 |
| putative protein-dependent dehydrogenase | ALQ54_00832 | Not Available | Negative | 832090 - 833481 | 49274.2 |
| 2fe-2s iron-sulfur cluster binding protein | ALQ54_100957 | Not Available | Negative | 833478 - 833768 | 10311.5 |
| spermidine/putrescine abc-type transport system | ALQ54_00833 | Not Available | Negative | 833785 - 834579 | 28785.0 |
| spermidine/putrescine abc-type transport system | ALQ54_00834 | Not Available | Negative | 834583 - 835455 | 31899.4 |
| spermidine/putrescine abc-type transport system | ALQ54_00835 | Not Available | Negative | 835452 - 836492 | 38051.1 |
| iclr family transcriptional regulator | ALQ54_00836 | Not Available | Positive | 836722 - 837561 | 30378.5 |
| methyl-accepting chemotaxis protein | ALQ54_00837 | Not Available | Positive | 837756 - 839375 | 57893.8 |
| hypothetical protein | ALQ54_04737 | Not Available | Negative | 839433 - 840407 | 36697.2 |
| hypothetical protein | ALQ54_00839 | Not Available | Negative | 840461 - 841165 | 24864.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










