Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ54_00821 | Not Available | Positive | 818149 - 818613 | 17035.7 |
| penicillin-binding protein 2 | ALQ54_00822 | Not Available | Positive | 818752 - 820641 | 70082.7 |
| pyruvate dehydrogenase | ALQ54_04734 | Not Available | Positive | 820702 - 822516 | 65419.9 |
| methyl-accepting chemotaxis protein | ALQ54_00824 | Not Available | Positive | 822888 - 824849 | 70527.0 |
| hypothetical protein | ALQ54_00825 | Not Available | Positive | 825468 - 825785 | 11970.2 |
| hypothetical protein | ALQ54_00826 | Not Available | Positive | 825991 - 826509 | 19437.3 |
| putative lipoprotein | ALQ54_00827 | Not Available | Positive | 826527 - 827060 | 20070.2 |
| cyclic pyranopterin monophosphate synthase | ALQ54_00828 | Not Available | Negative | 827100 - 828098 | 37152.0 |
| sodium /hydrogen antiporter, nhap family | ALQ54_00829 | Not Available | Negative | 828364 - 829710 | 48167.7 |
| spermidine/putrescine abc-type transport system | ALQ54_00830 | Not Available | Negative | 829860 - 830912 | 38068.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










