Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminase | ALQ54_00806 | Not Available | Positive | 795887 - 796795 | 32641.7 |
| putative lipoprotein | ALQ54_100434 | Not Available | Positive | 796814 - 797953 | 42006.3 |
| hypothetical protein | ALQ54_00807 | Not Available | Negative | 797961 - 798407 | 16964.6 |
| abc transporter atp-binding/permease | ALQ54_00808 | Not Available | Positive | 798475 - 800286 | 66894.1 |
| aryl-alcohol dehydrogenase-related oxidoreductase | ALQ54_00809 | Not Available | Positive | 800384 - 801421 | 38546.9 |
| glucose 1-dehydrogenase | ALQ54_00810 | Not Available | Positive | 801485 - 802288 | 28404.2 |
| glycosyl hydrolase, family 15 | ALQ54_100777 | Not Available | Positive | 802275 - 804107 | 69263.7 |
| putative membrane protein | ALQ54_100539 | Not Available | Negative | 804163 - 805617 | 52777.4 |
| putative integral membrane protein | ALQ54_00811 | Not Available | Negative | 805644 - 806612 | 34556.5 |
| short chain dehydrogenase | ALQ54_00812 | Not Available | Negative | 806609 - 807349 | 26540.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










