Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd-type multidrug efflux system, inner membrane transporter mexd | ALQ54_04729 | Not Available | Negative | 782916 - 786062 | 111920.0 |
| secretion protein hlyd | ALQ54_04732 | Not Available | Negative | 786090 - 787253 | 41019.9 |
| transcriptional regulator nfxb | ALQ54_00798 | Not Available | Positive | 787429 - 787980 | 20134.4 |
| sco1/senc/prrc protein | ALQ54_00799 | Not Available | Positive | 788155 - 788760 | 22018.7 |
| putative copper-binding protein | ALQ54_00800 | Not Available | Positive | 788760 - 789248 | 17118.6 |
| hypothetical protein | ALQ54_00801 | Not Available | Positive | 789599 - 790432 | 29409.9 |
| ferric siderophore uptake system, mota/tolq/exbb protein | ALQ54_00802 | Not Available | Positive | 790561 - 791289 | 25659.0 |
| ferric siderophore transport system protein, exbd/tolr family | ALQ54_00803 | Not Available | Positive | 791291 - 791692 | 14270.4 |
| tonb-dependent receptor:tonb-dependent receptor | ALQ54_00804 | Not Available | Positive | 791974 - 794376 | 86349.7 |
| aldolase ii super protein | ALQ54_00805 | Not Available | Positive | 794965 - 795816 | 30866.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










