Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative+-dependent alpha-aminoadipic semialdehyde dehydrogenase | ALQ54_05514 | Not Available | Negative | 771659 - 773155 | 53547.0 |
| 4-aminobutyrate aminotransferase | ALQ54_03852 | Not Available | Positive | 773405 - 774652 | 44399.6 |
| hypothetical protein | ALQ54_03853 | Not Available | Positive | 774676 - 776067 | 51111.5 |
| hypothetical protein | ALQ54_00124 | Not Available | Positive | 776727 - 777197 | 18191.9 |
| yd repeat protein | ALQ54_04462 | Not Available | Positive | 777420 - 777835 | 15904.5 |
| luciferase family monooxygenase | ALQ54_00792 | Not Available | Negative | 777975 - 779012 | 38975.7 |
| hypothetical protein | ALQ54_00793 | Not Available | Negative | 779220 - 779555 | 11955.5 |
| dimethyl sulfone monooxygenase sfng | ALQ54_00794 | Not Available | Positive | 779878 - 780978 | 40514.7 |
| hypothetical protein | ALQ54_101398 | Not Available | Negative | 781151 - 781270 | 4475.48 |
| ggdef domain-containing protein | ALQ54_00795 | Not Available | Positive | 781299 - 782891 | 59010.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










