Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf:atp-binding region, atpase-like:histidine kinase a | ALQ54_05512 | Not Available | Negative | 760112 - 762394 | 83777.9 |
| heme oxygenase | ALQ54_05513 | Not Available | Negative | 762346 - 762960 | 22441.1 |
| sulfatase protein | ALQ54_03844 | Not Available | Negative | 763311 - 765344 | 75949.9 |
| hypothetical protein | ALQ54_03845 | Not Available | Negative | 765355 - 765975 | 22615.6 |
| bnr repeat-containing glycosyl hydrolase | ALQ54_03846 | Not Available | Negative | 765972 - 767270 | 47367.9 |
| cytochrome protein | ALQ54_03847 | Not Available | Negative | 767309 - 767854 | 20791.7 |
| pepsy super protein | ALQ54_03848 | Not Available | Negative | 767854 - 768117 | 9843.82 |
| two-component dna-binding response regulator qseb | ALQ54_03849 | Not Available | Positive | 768285 - 768947 | 24641.1 |
| sensor histidine kinase qsec | ALQ54_100673 | Not Available | Positive | 768824 - 770317 | 55314.6 |
| fad dependent oxidoreductase | ALQ54_03850 | Not Available | Negative | 770330 - 771616 | 45555.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










