Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine/isoleucine/valine transporter permease subunit | ALQ54_02677 | Not Available | Positive | 729865 - 731130 | 46165.3 |
| high-affinity leucine/isoleucine/valine abc-type transport system | ALQ54_02678 | Not Available | Positive | 731127 - 731894 | 28010.2 |
| l-isoleucine abc transporter atp-binding proteinp-binding protein | ALQ54_02679 | Not Available | Positive | 731895 - 732596 | 25782.6 |
| putative membrane protein | ALQ54_02680 | Not Available | Positive | 732853 - 733533 | 24572.2 |
| hypothetical protein | ALQ54_02681 | Not Available | Positive | 733631 - 735244 | 58293.1 |
| outer membrane lipoprotein slyb | ALQ54_02682 | Not Available | Negative | 735351 - 735815 | 15767.9 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | ALQ54_02683 | Not Available | Negative | 735963 - 736610 | 24944.2 |
| ompa family outer membrane protein/peptidoglycan-associated protein | ALQ54_02684 | Not Available | Negative | 736907 - 738043 | 39328.6 |
| penicillin-binding protein, beta-lactamase s c | ALQ54_02685 | Not Available | Negative | 738197 - 739369 | 42053.1 |
| atp-dependent dna helicase ding | ALQ54_05235 | Not Available | Negative | 739455 - 741599 | 78867.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










