Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALQ54_05225 | Not Available | Positive | 697320 - 698405 | 40148.0 |
| peptidyl-prolyl cis-trans isomerase | ALQ54_02660 | Not Available | Positive | 698638 - 699201 | 20244.4 |
| putative multidrug abc-type transport system, atpase/permease fusion protein | ALQ54_02661 | Not Available | Positive | 699303 - 701135 | 67644.2 |
| hypothetical protein | ALQ54_05226 | Not Available | Negative | 701860 - 703011 | 43503.4 |
| leucine-rich repeat protein | ALQ54_05229 | Not Available | Negative | 703027 - 707997 | 186331.0 |
| 3-oxoacyl- synthase iii | ALQ54_02664 | Not Available | Negative | 708043 - 709164 | 40385.9 |
| atp-dependent rna helicase hrpa | ALQ54_05231 | Not Available | Negative | 709406 - 713356 | 149149.0 |
| putative toxin-antitoxin system antitoxin component | ALQ54_02666 | Not Available | Positive | 713491 - 713736 | 8827.74 |
| long-chain-fatty-acid--coa ligase | ALQ54_02667 | Not Available | Negative | 714009 - 715700 | 61874.6 |
| long-chain-fatty-acid--coa ligase | ALQ54_05234 | Not Available | Negative | 716055 - 717767 | 62659.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










