Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ALQ54_05222 | Not Available | Positive | 686072 - 687148 | 39772.7 |
| major facilitator superfamily | ALQ54_02651 | Not Available | Positive | 687194 - 687577 | 12895.0 |
| hypothetical protein | ALQ54_02652 | Not Available | Positive | 688051 - 688488 | 15673.9 |
| hypothetical protein | ALQ54_02653 | Not Available | Negative | 688545 - 689120 | 21250.3 |
| hypothetical protein | ALQ54_02654 | Not Available | Positive | 689575 - 690120 | 21161.7 |
| short-chain dehydrogenase | ALQ54_02655 | Not Available | Positive | 690199 - 690933 | 25952.1 |
| hypothetical protein | ALQ54_02656 | Not Available | Negative | 690935 - 691825 | 32825.0 |
| hypothetical protein | ALQ54_100608 | Not Available | Negative | 691855 - 692034 | 6481.56 |
| bifunctional poly c5 epimerase / o-acetylhydrolase psme | ALQ54_02657 | Not Available | Positive | 692080 - 696912 | 166570.0 |
| hypothetical protein | ALQ54_05224 | Not Available | Negative | 697100 - 697414 | 11598.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










