Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ54_101972 | Not Available | Positive | 671384 - 672544 | 43498.5 |
| hypothetical protein | ALQ54_02642 | Not Available | Positive | 673016 - 674806 | 68049.5 |
| hypothetical protein | ALQ54_100284 | Not Available | Positive | 677021 - 679213 | 79154.1 |
| lysr family transcriptional regulator | ALQ54_05218 | Not Available | Negative | 679523 - 680458 | 34435.4 |
| mandelate racemase/muconate lactonizing protein | ALQ54_05219 | Not Available | Positive | 680499 - 681668 | 43177.5 |
| c4-dicarboxylate transport protein | ALQ54_02645 | Not Available | Positive | 681770 - 683077 | 46092.1 |
| tetr family transcriptional regulator | ALQ54_05220 | Not Available | Negative | 683137 - 683736 | 21953.4 |
| short-chain dehydrogenase/reductase sdr | ALQ54_05221 | Not Available | Positive | 683799 - 684590 | 28338.2 |
| hypothetical protein | ALQ54_02648 | Not Available | Negative | 684657 - 684953 | 11101.2 |
| short-chain dehydrogenase/reductase family oxidoreductase | ALQ54_02649 | Not Available | Negative | 685012 - 686055 | 38154.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










