Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | ALQ54_05216 | Not Available | Negative | 659834 - 661195 | 49581.5 |
| regulatory protein lysr | ALQ54_02633 | Not Available | Negative | 661487 - 662392 | 33247.4 |
| hypothetical protein | ALQ54_02634 | Not Available | Positive | 662475 - 663257 | 29214.5 |
| hypothetical protein | ALQ54_02635 | Not Available | Negative | 663318 - 664283 | 35209.9 |
| major facilitator transporter | ALQ54_02636 | Not Available | Negative | 664343 - 665605 | 43788.2 |
| lysr family transcriptional regulator | ALQ54_02637 | Not Available | Positive | 665711 - 666604 | 32992.6 |
| hypothetical protein | ALQ54_05217 | Not Available | Negative | 666620 - 667759 | 41216.7 |
| mechanosensitive ion channel mscs | ALQ54_02639 | Not Available | Positive | 667891 - 669201 | 49137.5 |
| terf-like protein | ALQ54_02640 | Not Available | Positive | 669242 - 669895 | 24306.5 |
| hypothetical protein | ALQ54_02641 | Not Available | Positive | 669895 - 670572 | 24830.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










