Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative adra-like diguanylate cye | ALQ54_02607 | Not Available | Positive | 634789 - 635865 | 39853.6 |
| hypothetical protein | ALQ54_100523 | Not Available | Negative | 635870 - 636739 | 32067.7 |
| hypothetical protein | ALQ54_100680 | Not Available | Negative | 636794 - 637228 | 15610.4 |
| hypothetical protein | ALQ54_02608 | Not Available | Negative | 637435 - 638166 | 27650.0 |
| luxr family transcriptional regulator | ALQ54_100251 | Not Available | Negative | 638350 - 638679 | 12379.4 |
| metabolite-proton symporter | ALQ54_02609 | Not Available | Negative | 639075 - 640391 | 47393.6 |
| hypothetical protein | ALQ54_101926 | Not Available | Positive | 640362 - 640481 | 4379.29 |
| tonb-dependent siderophore receptor | ALQ54_05213 | Not Available | Negative | 640659 - 642926 | 83202.7 |
| peptidase | ALQ54_02611 | Not Available | Positive | 643136 - 643444 | 11185.2 |
| hypothetical protein | ALQ54_05214 | Not Available | Negative | 643538 - 644719 | 43263.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










