Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ54_05657 | Not Available | Negative | 1549038 - 1549487 | 16070.4 |
| Hypothetical protein | ALQ54_05658 | Not Available | Positive | 1549589 - 1549864 | 10223.3 |
| Hypothetical protein | ALQ54_04281 | Not Available | Positive | 1549890 - 1550144 | 9483.42 |
| hypothetical protein | ALQ54_04282 | Not Available | Positive | 1550246 - 1550467 | 8274.9 |
| Putative transposase | ALQ54_04283 | Not Available | Positive | 1550774 - 1551385 | 22260.4 |
| Hypothetical protein | ALQ54_04284 | Not Available | Positive | 1551417 - 1551878 | 17305.7 |
| Portal protein | ALQ54_04285 | Not Available | Positive | 1553163 - 1554584 | 52562.0 |
| Head morphogenesis protein | ALQ54_04286 | Not Available | Positive | 1554559 - 1555644 | 40081.0 |
| Hypothetical protein | ALQ54_05659 | Not Available | Positive | 1556064 - 1556798 | 26240.9 |
| Major capsid protein | ALQ54_04288 | Not Available | Positive | 1556811 - 1557761 | 33936.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










