Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonates family abc transporter periplasmic substrate-binding protein | ALQ54_03719 | Not Available | Positive | 554643 - 555632 | 34959.1 |
| acyl-coa dehydrogenase protein | ALQ54_05480 | Not Available | Positive | 555636 - 556847 | 43827.9 |
| trimethylamine-n-oxide reductase | ALQ54_05481 | Not Available | Negative | 556854 - 559166 | 85110.6 |
| aliphatic sulfonate abc transporter periplasmic substrate-binding protein | ALQ54_100402 | Not Available | Negative | 559163 - 560179 | 36302.5 |
| lysr family transcriptional regulator | ALQ54_03722 | Not Available | Negative | 560273 - 561199 | 34755.9 |
| pirin-related protein | ALQ54_03723 | Not Available | Positive | 561365 - 562087 | 26356.9 |
| penicillin amidase | ALQ54_05509 | Not Available | Negative | 562393 - 564933 | 92379.7 |
| glutathione s-transferase | ALQ54_03828 | Not Available | Negative | 565038 - 565682 | 24603.4 |
| repressor protein c2 | ALQ54_03829 | Not Available | Positive | 565779 - 566087 | 11145.9 |
| putative prophage repressor protein | ALQ54_03830 | Not Available | Positive | 566150 - 566806 | 23579.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










