Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein | ALQ54_03711 | Not Available | Positive | 544416 - 545870 | 52939.9 |
| membrane protein-like protein | ALQ54_03712 | Not Available | Positive | 546423 - 546734 | 11885.5 |
| ybbf/lpxh-related metallophosphatase | ALQ54_05478 | Not Available | Negative | 546745 - 547620 | 33201.7 |
| rdx family selenoprotein | ALQ54_03714 | Not Available | Negative | 547660 - 547962 | 11261.5 |
| aliphatic sulfonates import atp-binding protein ssub | ALQ54_100378 | Not Available | Negative | 548014 - 548838 | 29758.3 |
| binding-protein dependent transport system inner membrane protein | ALQ54_03715 | Not Available | Negative | 548843 - 549700 | 31390.3 |
| alkanesulfonate monooxygenase | ALQ54_03716 | Not Available | Positive | 549942 - 551045 | 39991.2 |
| transcriptional regulator, lysr family | ALQ54_03717 | Not Available | Negative | 551111 - 552079 | 35095.1 |
| hypothetical protein | ALQ54_03718 | Not Available | Positive | 552218 - 552838 | 22626.3 |
| rhodanese-related sulfurtransferase | ALQ54_100717 | Not Available | Positive | 552835 - 554418 | 57924.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










