Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanine--d-glutamate ligase | ALQ54_00060 | Not Available | Negative | 496573 - 497919 | 48163.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | ALQ54_00061 | Not Available | Negative | 497925 - 499007 | 39486.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ALQ54_00062 | Not Available | Negative | 499007 - 500377 | 47234.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | ALQ54_00063 | Not Available | Negative | 500370 - 501833 | 52091.1 |
| cell division protein ftsi | ALQ54_00064 | Not Available | Negative | 501833 - 503563 | 63118.4 |
| cell division protein ftsl | ALQ54_00065 | Not Available | Negative | 503560 - 503853 | 10945.5 |
| ribosomal rna small subunit methyltransferase h | ALQ54_00066 | Not Available | Negative | 503850 - 504791 | 34213.0 |
| protein mraz | ALQ54_00067 | Not Available | Negative | 504794 - 505249 | 17180.8 |
| ribosomal rna small subunit methyltransferase i | ALQ54_00068 | Not Available | Negative | 506000 - 506869 | 31453.0 |
| hypothetical protein | ALQ54_101653 | Not Available | Positive | 506900 - 507043 | 5151.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










