Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit seca | ALQ54_04450 | Not Available | Negative | 483817 - 486621 | 105599.0 |
| hypothetical protein | ALQ54_00051 | Not Available | Positive | 486864 - 487319 | 17236.0 |
| udp-3-o- n-acetylglucosamine deacetylase | ALQ54_00052 | Not Available | Negative | 487436 - 488347 | 33343.8 |
| cell division protein ftsz | ALQ54_04451 | Not Available | Negative | 488460 - 489647 | 41568.2 |
| cell division protein ftsa | ALQ54_00054 | Not Available | Negative | 489749 - 491005 | 44539.8 |
| cell division protein ftsq | ALQ54_00055 | Not Available | Negative | 491020 - 491889 | 32721.8 |
| d-alanine--d-alanine ligase | ALQ54_00056 | Not Available | Negative | 491893 - 492852 | 33887.6 |
| udp-n-acetylmuramate--l-alanine ligase | ALQ54_00057 | Not Available | Negative | 492849 - 494309 | 52647.6 |
| udp-n-acetylglucosamine--n-acetylmuramyl- pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | ALQ54_00058 | Not Available | Negative | 494302 - 495372 | 37851.1 |
| lipid ii flippase ftsw | ALQ54_00059 | Not Available | Negative | 495362 - 496576 | 44001.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










