Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na antiporter nhaa | ALQ54_03578 | Not Available | Negative | 376890 - 378068 | 40872.3 |
| extracellular solute-binding protein | ALQ54_03579 | Not Available | Negative | 378235 - 378408 | 6668.93 |
| peptidase s33, tricorn interacting factor 1 | ALQ54_03580 | Not Available | Positive | 378575 - 379498 | 34529.0 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALQ54_03581 | Not Available | Positive | 379678 - 381390 | 61053.4 |
| hypothetical protein | ALQ54_100894 | Not Available | Negative | 381616 - 381732 | 4458.51 |
| gaf domain protein | ALQ54_05451 | Not Available | Positive | 381797 - 382309 | 18922.7 |
| gcn5-related n-acetyltransferase | ALQ54_03583 | Not Available | Negative | 382323 - 382778 | 16691.3 |
| gaf/ggdef/eal domain protein | ALQ54_03584 | Not Available | Positive | 383130 - 384965 | 68825.1 |
| putative suulfite exporter, taue/safe family | ALQ54_03585 | Not Available | Positive | 385051 - 385842 | 27557.9 |
| hypothetical protein | ALQ54_03586 | Not Available | Positive | 386062 - 386262 | 7555.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










