Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna amidotransferase subunit a | ALQ54_03540 | Not Available | Positive | 316521 - 317972 | 51854.7 |
| aspartyl/glutamyl-trna amidotransferase subunit b | ALQ54_03541 | Not Available | Positive | 317983 - 319428 | 53059.3 |
| rpla protein | ALQ54_03542 | Not Available | Positive | 319807 - 320175 | 13359.9 |
| k+-dependent na+/ca+ exchanger related-protein | ALQ54_03543 | Not Available | Positive | 320230 - 321285 | 36975.1 |
| carboxymuconolactone decarboxylase | ALQ54_100108 | Not Available | Positive | 321298 - 321702 | 14734.5 |
| putative auxin efflux pump | ALQ54_03544 | Not Available | Negative | 321699 - 322640 | 33364.9 |
| extracelullar dna degradation protein edda | ALQ54_03545 | Not Available | Negative | 322748 - 324331 | 59262.1 |
| putative sam-dependent methyltransferase | ALQ54_05435 | Not Available | Positive | 324489 - 325505 | 37368.5 |
| putative exported protein | ALQ54_100061 | Not Available | Positive | 325584 - 328613 | 111128.0 |
| hypothetical protein | ALQ54_03546 | Not Available | Positive | 328610 - 328948 | 12420.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










