Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide abc-type transport system, permease protein lptc | ALQ54_03521 | Not Available | Positive | 295646 - 296218 | 21391.4 |
| liposaccharide abc-type transport system, atp-binding protein lptb | ALQ54_03522 | Not Available | Positive | 296754 - 297479 | 26530.2 |
| rna polymerase sigma-54 factor | ALQ54_03523 | Not Available | Positive | 297687 - 299156 | 55807.8 |
| ribosomal subunit interface protein raia/yfia | ALQ54_03524 | Not Available | Positive | 299232 - 299540 | 11610.2 |
| pts iia-like nitrogen-regulatory protein ptsn | ALQ54_03525 | Not Available | Positive | 299551 - 300015 | 16655.2 |
| nucleotide-binding protein | ALQ54_03526 | Not Available | Positive | 300018 - 300875 | 32254.8 |
| phosphocarrier protein hpr | ALQ54_03527 | Not Available | Positive | 300891 - 301163 | 9764.97 |
| hypothetical protein | ALQ54_100379 | Not Available | Negative | 301188 - 301322 | 5034.51 |
| superoxide dismutase | ALQ54_03528 | Not Available | Negative | 301350 - 301961 | 22630.5 |
| hypothetical protein | ALQ54_03529 | Not Available | Negative | 301963 - 302481 | 19686.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










