Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheine adenylyltransferase | ALQ54_00413 | Not Available | Positive | 279868 - 280347 | 17856.5 |
| 4fe-4s ferredoxin | ALQ54_00414 | Not Available | Positive | 280446 - 280697 | 9378.05 |
| hypothetical protein | ALQ54_00415 | Not Available | Negative | 280707 - 281069 | 12116.0 |
| formamidopyrimidine-dna glycosylase | ALQ54_00416 | Not Available | Negative | 281143 - 281961 | 30413.0 |
| putative signal transduction protein | ALQ54_00417 | Not Available | Negative | 282001 - 282867 | 31983.0 |
| protease pfpi | ALQ54_100153 | Not Available | Positive | 283017 - 283592 | 20406.2 |
| putative sam-dependent methyltransferase | ALQ54_00418 | Not Available | Positive | 283678 - 284874 | 43860.1 |
| syringomycin synthetase e | ALQ54_04459 | Not Available | Negative | 285026 - 285534 | 18358.2 |
| histidinol-phosphate aminotransferase | ALQ54_03509 | Not Available | Negative | 285829 - 286881 | 38935.3 |
| histidinol dehydrogenase | ALQ54_03510 | Not Available | Negative | 286881 - 288227 | 48134.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










