Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase/reductase oxidoreductase | ALQ54_01904 | Not Available | Positive | 142464 - 143387 | 32700.8 |
| hypothetical protein | ALQ54_01905 | Not Available | Positive | 143599 - 143703 | 3627.4 |
| protein sirb1 | ALQ54_01906 | Not Available | Negative | 143908 - 144786 | 33350.1 |
| hypothetical protein | ALQ54_01907 | Not Available | Negative | 144793 - 145665 | 31564.1 |
| peptidase aspartic, active site protein | ALQ54_01908 | Not Available | Negative | 145697 - 147661 | 72435.9 |
| bacteriophage n4 adsorption protein b | ALQ54_01909 | Not Available | Negative | 147658 - 149778 | 81497.8 |
| bacterial cellulose synthase-like protein | ALQ54_01910 | Not Available | Negative | 149791 - 152007 | 78438.3 |
| udp-n-acetylglucosamine 2-epimerase | ALQ54_05030 | Not Available | Negative | 152174 - 153490 | 48829.0 |
| yebg protein | ALQ54_01912 | Not Available | Negative | 154127 - 154393 | 9650.41 |
| putative membrane protein, psie superfamily | ALQ54_01913 | Not Available | Positive | 154804 - 155292 | 17755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










