Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminoacrylate peracid reductase rutc | ALQ54_01880 | Not Available | Negative | 116978 - 117361 | 13659.5 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | ALQ54_01881 | Not Available | Negative | 117372 - 118109 | 26362.2 |
| pyrimidine monooxygenase ruta | ALQ54_01882 | Not Available | Negative | 118109 - 119191 | 39573.1 |
| transcriptional regulator, tetr family | ALQ54_01883 | Not Available | Positive | 119335 - 120213 | 32616.7 |
| basic membrane lipoprotein/periplasmic substrate-binding protein | ALQ54_05022 | Not Available | Positive | 120382 - 121518 | 40714.6 |
| putative abc-type transport system, atp-binding protein | ALQ54_01885 | Not Available | Positive | 121515 - 123026 | 53728.6 |
| abc-type transport system, permease protein | ALQ54_01886 | Not Available | Positive | 123040 - 124128 | 39568.6 |
| nucleoside abc transporter membrane protein | ALQ54_01887 | Not Available | Positive | 124128 - 125054 | 32426.8 |
| peptidoglycan-associated protein | ALQ54_01888 | Not Available | Positive | 125168 - 125857 | 23854.9 |
| acyltransferase | ALQ54_01889 | Not Available | Negative | 125966 - 126871 | 34957.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










