Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | ALQ54_01870 | Not Available | Negative | 103060 - 103644 | 20762.8 |
| ribosomal rna small subunit methyltransferase c | ALQ54_01871 | Not Available | Negative | 103891 - 104889 | 36086.4 |
| homoserine/lysine/threonine efflux protein, lyse/ygga family | ALQ54_01872 | Not Available | Positive | 105124 - 105756 | 22227.6 |
| long-chain-fatty-acid--coa ligase | ALQ54_01873 | Not Available | Positive | 105914 - 107596 | 62052.7 |
| hypothetical protein | ALQ54_01874 | Not Available | Positive | 107905 - 109842 | 69781.0 |
| hypothetical protein | ALQ54_01875 | Not Available | Positive | 109859 - 111235 | 51098.4 |
| atp-dependent transcriptional regulator, luxr family | ALQ54_01876 | Not Available | Positive | 111445 - 114174 | 101118.0 |
| metal-dependent phosphohydrolase | ALQ54_01877 | Not Available | Negative | 114199 - 115386 | 43499.0 |
| fmn reductase rutf | ALQ54_01878 | Not Available | Negative | 115607 - 116143 | 18539.0 |
| putative aminoacrylate hydrolase rutd | ALQ54_01879 | Not Available | Negative | 116157 - 116936 | 28558.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










