Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ54_01824 | Not Available | Positive | 55863 - 56345 | 17999.2 |
| hypothetical protein | ALQ54_01825 | Not Available | Positive | 56531 - 57139 | 22685.1 |
| hypothetical protein | ALQ54_101606 | Not Available | Positive | 57136 - 57408 | 10096.1 |
| hypothetical protein | ALQ54_01826 | Not Available | Positive | 58015 - 60162 | 79374.4 |
| integrase | ALQ54_01827 | Not Available | Negative | 62364 - 63551 | 44935.1 |
| ribosome-binding atpase ychf | ALQ54_01828 | Not Available | Negative | 63768 - 64868 | 40040.1 |
| peptidyl-trna hydrolase | ALQ54_01829 | Not Available | Negative | 64890 - 65474 | 20938.2 |
| 50s ribosomal protein l25 | ALQ54_05017 | Not Available | Negative | 65639 - 66346 | 25767.9 |
| ribose-phosphate pyrophosphokinase | ALQ54_01831 | Not Available | Negative | 66378 - 67319 | 34120.2 |
| Trna-gln | Not Available | Not Available | Positive | 67365 - 67439 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










