Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase, family 2 | ALQ54_01811 | Not Available | Positive | 21566 - 22420 | 30873.5 |
| permease of the major facilitator superfamily | ALQ54_100750 | Not Available | Positive | 22375 - 23877 | 55462.4 |
| glucose-1-phosphate thymidylyltransferase | ALQ54_01812 | Not Available | Negative | 23987 - 24868 | 32351.7 |
| dtdp-4-dehydrorhamnose reductase | ALQ54_01813 | Not Available | Negative | 24877 - 25782 | 32236.5 |
| glycosyl transferase, group 2 protein | ALQ54_100222 | Not Available | Negative | 26299 - 28689 | 86911.1 |
| glycosyl transferase protein | ALQ54_05016 | Not Available | Negative | 28686 - 31169 | 90598.2 |
| hypothetical protein | ALQ54_100279 | Not Available | Negative | 32752 - 33744 | 34935.0 |
| type i secretion system abc-type transporter, prtd family | ALQ54_01815 | Not Available | Positive | 34361 - 36115 | 63453.8 |
| type i secretion system outer membrane protein | ALQ54_01816 | Not Available | Positive | 37454 - 38854 | 51462.6 |
| glycosyl transferase group 1 | ALQ54_01817 | Not Available | Negative | 38898 - 40046 | 42375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










