Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine transaminase alat | ALQ54_03820 | Not Available | Negative | 976324 - 977577 | 46267.9 |
| peptide methionine sulfoxide reductase msrb | ALQ54_03821 | Not Available | Positive | 977724 - 978119 | 14738.6 |
| glutathione peroxidase | ALQ54_03822 | Not Available | Positive | 978174 - 978662 | 18041.9 |
| sensor histidine kinase/response regulator | ALQ54_05506 | Not Available | Negative | 978667 - 981084 | 88723.0 |
| hypothetical protein | ALQ54_05508 | Not Available | Positive | 981104 - 981994 | 33873.2 |
| hypothetical protein | ALQ54_03825 | Not Available | Positive | 981991 - 982473 | 17319.4 |
| hypothetical protein | ALQ54_03826 | Not Available | Negative | 982528 - 983298 | 28853.9 |
| amino acid adenylation | ALQ54_04508 | Not Available | Positive | 983609 - 984530 | 33923.5 |
| amino acid adenylation | ALQ54_101706 | Not Available | Negative | 984531 - 985786 | 45754.8 |
| regulatory protein, gntr | ALQ54_100200 | Not Available | Negative | 986066 - 987169 | 41092.4 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










