Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain 1188_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1248512 bp
Thymine Count
1236323 bp
Guanine Count
1779315 bp
Cytosine Count
1783534 bp
Genome Length
6058125 bp
Protein-coding Genes
5136 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| organic hydroperoxide resistance transcriptional regulator | ALQ54_03811 | Not Available | Negative | 966112 - 966585 | 17483.4 |
| regulatory protein lysr | ALQ54_05500 | Not Available | Negative | 967512 - 968411 | 33355.6 |
| putative small protein | ALQ54_05501 | Not Available | Positive | 968359 - 968694 | 12604.2 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | ALQ54_05502 | Not Available | Negative | 968721 - 970166 | 53864.0 |
| hypothetical protein | ALQ54_03815 | Not Available | Positive | 970234 - 970998 | 28391.0 |
| hypothetical protein | ALQ54_05503 | Not Available | Positive | 971134 - 971253 | 4277.48 |
| atp-dependent rna helicase dead | ALQ54_03816 | Not Available | Positive | 971453 - 973126 | 60895.8 |
| catalytic ligb subunit of aromatic ring-opening dioxygenase | ALQ54_03817 | Not Available | Negative | 973217 - 973984 | 27979.5 |
| thiopurine s-methyltransferase | ALQ54_05504 | Not Available | Positive | 974065 - 974742 | 25246.1 |
| protease htpx | ALQ54_03819 | Not Available | Negative | 975171 - 976058 | 32258.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










