Pseudomonas syringae pv. papulans strain ICMP 4040

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. papulans strain ICMP 4040 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and the presence of flagella, which provides it with mobility. This strain is classified as a heterotroph, relying on organic compounds as its energy source. As an aerobic organism, it requires oxygen for its metabolic processes and thrives within a mesophilic temperature range. The strain possesses a unique cellular structure with two membranes and a single replicon, indicating a streamlined genetic architecture. Its ecological role is defined as free-living, allowing it to adapt to multiple habitats without dependence on a host organism. The accession number for this strain is RBPA00000000.1, which can be used for reference in scientific databases. Pseudomonas syringae pv. papulans strain ICMP 4040 exemplifies the diverse metabolic adaptations found within the Pseudomonas genus, showcasing its ability to thrive in various environments. Its mobility and aerobic nature enable it to exploit different ecological niches, potentially influencing plant health and microbial community dynamics. This adaptability may contribute to its role in plant pathology, as members of the Pseudomonas syringae group are known to be significant plant pathogens. Understanding the traits of strain ICMP 4040 can provide insights into its ecological interactions and potential impacts on agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. papulans strain ICMP 4040

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. papulans strain ICMP 4040
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. papulans strain ICMP 4040

Gene Summary

Adenine Count

1254419 bp

Thymine Count

1255187 bp

Guanine Count

1799991 bp

Cytosine Count

1790472 bp

Genome Length

6121558 bp

Protein-coding Genes

5392 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fimbrial bioproteinsis outer membrane usher proteinALQ60_05403Not AvailableNegative5848746 - 585130492661.0
pili assembly chaperone: pili assembly chaperoneALQ60_04188Not AvailableNegative5851297 - 585204327215.6
fimbrial proteinALQ60_04189Not AvailableNegative5852150 - 585270418365.7
ribosomal rna large subunit methyltransferase fALQ60_00396Not AvailableNegative5853040 - 585402636080.4
valine--trna ligaseALQ60_04487Not AvailableNegative5854184 - 5857186113146.0
hypothetical proteinALQ60_00398Not AvailableNegative5857219 - 585765315955.5
dna polymerase iii, chi subunitALQ60_00399Not AvailableNegative5857661 - 585808916165.0
putative cytosol aminopeptidaseALQ60_00400Not AvailableNegative5858147 - 585963752440.7
putative lipopolysaccharide abc-type transport systemALQ60_00401Not AvailablePositive5859957 - 586108441720.7
putative permeaseALQ60_100106Not AvailablePositive5861071 - 586213238382.3

Displaying genes 5341 – 5350 of 5580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.