Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. papulans strain ICMP 4040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1254419 bp
Thymine Count
1255187 bp
Guanine Count
1799991 bp
Cytosine Count
1790472 bp
Genome Length
6121558 bp
Protein-coding Genes
5392 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion apparatus lipoprotein, yscj/hrcj family | ALQ60_04372 | Not Available | Negative | 5205674 - 5206480 | 29049.4 |
| type iii secretion system protein hrpb | ALQ60_04373 | Not Available | Negative | 5206489 - 5206863 | 12769.2 |
| type iii secretion system helper protein hrpz1 | ALQ60_05449 | Not Available | Negative | 5206891 - 5207925 | 34823.7 |
| type iii secretion system helper protein hrpa2 | ALQ60_04375 | Not Available | Negative | 5207975 - 5208301 | 11006.8 |
| type iii transcriptional regulator hrps | ALQ60_04376 | Not Available | Negative | 5208394 - 5209302 | 33405.5 |
| type iii secretion system transcriptional regulator hrpr | ALQ60_04377 | Not Available | Negative | 5209348 - 5210292 | 35083.6 |
| membrane-bound lytic murein transglycosylase d | ALQ60_101803 | Not Available | Negative | 5211367 - 5212977 | 59164.7 |
| type iii secretion system effector avre1 | ALQ60_04378 | Not Available | Positive | 5213109 - 5218469 | 194292.0 |
| dspfavrf | ALQ60_04379 | Not Available | Negative | 5218532 - 5218921 | 14425.1 |
| effector protein hopm1 | ALQ60_04380 | Not Available | Negative | 5219027 - 5221189 | 75707.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.










