Pseudomonas syringae pv. papulans strain ICMP 4040

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. papulans strain ICMP 4040 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and the presence of flagella, which provides it with mobility. This strain is classified as a heterotroph, relying on organic compounds as its energy source. As an aerobic organism, it requires oxygen for its metabolic processes and thrives within a mesophilic temperature range. The strain possesses a unique cellular structure with two membranes and a single replicon, indicating a streamlined genetic architecture. Its ecological role is defined as free-living, allowing it to adapt to multiple habitats without dependence on a host organism. The accession number for this strain is RBPA00000000.1, which can be used for reference in scientific databases. Pseudomonas syringae pv. papulans strain ICMP 4040 exemplifies the diverse metabolic adaptations found within the Pseudomonas genus, showcasing its ability to thrive in various environments. Its mobility and aerobic nature enable it to exploit different ecological niches, potentially influencing plant health and microbial community dynamics. This adaptability may contribute to its role in plant pathology, as members of the Pseudomonas syringae group are known to be significant plant pathogens. Understanding the traits of strain ICMP 4040 can provide insights into its ecological interactions and potential impacts on agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. papulans strain ICMP 4040

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. papulans strain ICMP 4040
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. papulans strain ICMP 4040

Gene Summary

Adenine Count

1254419 bp

Thymine Count

1255187 bp

Guanine Count

1799991 bp

Cytosine Count

1790472 bp

Genome Length

6121558 bp

Protein-coding Genes

5392 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinALQ60_03623Not AvailablePositive4418991 - 441989333058.3
ferrochelataseALQ60_03624Not AvailablePositive4419921 - 442094338379.6
xanthine/uracil permease proteinALQ60_05313Not AvailableNegative4421140 - 442246546394.3
uracil phosphoribosyltransferaseALQ60_03626Not AvailableNegative4422422 - 442306022936.2
hypoxanthine-guanine phosphoribosyltransferaseALQ60_100132Not AvailablePositive4423211 - 442382522800.5
hypothetical proteinALQ60_03627Not AvailablePositive4423892 - 442439518344.1
aminopeptidaseALQ60_03628Not AvailablePositive4424462 - 442474911148.2
amino acid abc transporter permeaseALQ60_03629Not AvailableNegative4424948 - 442578130587.1
extracellular solute-binding proteinALQ60_03630Not AvailableNegative4425778 - 442659930033.6
homocysteine s-methyltransferaseALQ60_03631Not AvailablePositive4426710 - 442760631500.0

Displaying genes 4071 – 4080 of 5580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.