Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RBOP00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Pseudomonas genus, this strain is likely to exhibit traits typical of Pseudomonas species, including metabolic versatility and the ability to thrive in various environments. Pseudomonas species are known for their role in biocontrol, plant health, and environmental remediation. The specific pathovar designation (pv. striafaciens) suggests a specialization that could be associated with plant interactions or phytopathogenicity, although specific pathogenic traits or ecological roles of strain ICMP 4418 are not detailed in the provided data. The presence of a single replicon may imply a simplified genetic architecture, which can influence the strain's adaptability and ecological niche. Such traits are significant in microbiological studies, as they can affect how the organism interacts with its environment, including its plant hosts or surrounding microbial communities. Understanding the genetic makeup and ecological role of Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418 can contribute to broader insights into its potential applications in agriculture or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas coronafaciens
Strainpv. striafaciens strain ICMP 4418

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418

Gene Summary

Adenine Count

1228453 bp

Thymine Count

1254504 bp

Guanine Count

1701358 bp

Cytosine Count

1675659 bp

Genome Length

5874910 bp

Protein-coding Genes

5069 genes

Non-Coding Genes

197 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione-independent formaldehyde dehydrogenaseALQ71_02459Not AvailableNegative449866 - 45106541735.2
formyltetrahydrofolate deformylaseALQ71_02460Not AvailableNegative451115 - 45197232021.3
sarcosine oxidase, subunit gammaALQ71_02461Not AvailableNegative452222 - 45285422999.6
sarcosine oxidase alpha subunitALQ71_02462Not AvailableNegative452906 - 455926109558.0
sarcosine oxidase subunit deltaALQ71_02463Not AvailableNegative455923 - 45621911431.4
sarcosine oxidase, subunit betaALQ71_02464Not AvailableNegative456235 - 45748545270.1
serine hydroxymethyltransferaseALQ71_02465Not AvailableNegative457503 - 45875644935.4
glycine betaine/l-proline transport atp-binding subunitALQ71_02466Not AvailableNegative459012 - 46019043326.8
glycine/betaine/l-proline abc transporter, permease proteinALQ71_02467Not AvailableNegative460187 - 46103230497.5
glycine betaine/l-proline abc transporter periplasmic substrate-binding proteinALQ71_02468Not AvailableNegative461100 - 46204734548.5

Displaying genes 541 – 550 of 5266 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.