Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RBOP00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Pseudomonas genus, this strain is likely to exhibit traits typical of Pseudomonas species, including metabolic versatility and the ability to thrive in various environments. Pseudomonas species are known for their role in biocontrol, plant health, and environmental remediation. The specific pathovar designation (pv. striafaciens) suggests a specialization that could be associated with plant interactions or phytopathogenicity, although specific pathogenic traits or ecological roles of strain ICMP 4418 are not detailed in the provided data. The presence of a single replicon may imply a simplified genetic architecture, which can influence the strain's adaptability and ecological niche. Such traits are significant in microbiological studies, as they can affect how the organism interacts with its environment, including its plant hosts or surrounding microbial communities. Understanding the genetic makeup and ecological role of Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418 can contribute to broader insights into its potential applications in agriculture or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas coronafaciens
Strainpv. striafaciens strain ICMP 4418

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas coronafaciens pv. striafaciens strain ICMP 4418

Gene Summary

Adenine Count

1228453 bp

Thymine Count

1254504 bp

Guanine Count

1701358 bp

Cytosine Count

1675659 bp

Genome Length

5874910 bp

Protein-coding Genes

5069 genes

Non-Coding Genes

197 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogen regulation protein ntrbALQ71_02375Not AvailableNegative351602 - 35268740002.6
hypothetical proteinALQ71_02376Not AvailableNegative352971 - 35360023145.2
hypothetical proteinALQ71_02377Not AvailableNegative353597 - 35413919759.6
chorismate mutaseALQ71_02378Not AvailableNegative354219 - 35477620552.8
glutamine synthetaseALQ71_04928Not AvailableNegative354942 - 35644755587.7
trna su8 sulfurtransferaseALQ71_100153Not AvailablePositive356622 - 35813956690.2
gtp-binding protein typaALQ71_02380Not AvailablePositive358281 - 36010166945.4
regulatory protein, deorALQ71_02381Not AvailableNegative360203 - 36102729490.6
sorbitol dehydrogenaseALQ71_02382Not AvailableNegative361159 - 36195628133.6
sugar abc transporter periplasmic sugar-binding proteinALQ71_04929Not AvailableNegative361972 - 36342652783.6

Displaying genes 451 – 460 of 5266 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.