Pseudomonas savastanoi pv. glycinea strain ICMP 4324

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. glycinea strain ICMP 4324 is a Gram-negative, rod-shaped bacterium exhibiting mobility due to the presence of flagella. This organism is classified as a heterotroph, relying on organic compounds as its energy source, and is an aerobe, necessitating oxygen for growth. The strain thrives optimally at a temperature of 28°C and is categorized as mesophilic, indicating its preference for moderate temperature conditions. This bacterium is known for its pathogenicity, particularly affecting important agricultural hosts such as Hordeum vulgare (barley), Glycine max (soybean), and Nicotiana tabacum (tobacco). It causes bacterial blight in soybean, a significant disease that can lead to substantial crop losses. Pseudomonas savastanoi pv. glycinea strain ICMP 4324 is characterized by a free-living biotic relationship, suggesting that it does not rely on a host organism for survival outside of its pathogenic interactions. The organism has a single replicon and is surrounded by two membranes, consistent with the characteristics of Gram-negative bacteria. The ecological implications of this strain are noteworthy, as its ability to infect multiple crop species highlights its potential impact on agricultural ecosystems. The presence of this pathogen in various habitats underscores the importance of monitoring and managing its spread to safeguard crop health and agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. glycinea strain ICMP 4324

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. glycinea strain ICMP 4324
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Hordeum vulgare, Glycine max, Nicotiana tabacum
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. glycinea strain ICMP 4324

Gene Summary

Adenine Count

1274445 bp

Thymine Count

1277040 bp

Guanine Count

1749946 bp

Cytosine Count

1750360 bp

Genome Length

6075658 bp

Protein-coding Genes

5547 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic murein transglycosylase bALQ73_03746Not AvailableNegative4962304 - 496333238409.7
rod shape-determining protein rodaALQ73_03747Not AvailableNegative4963329 - 496447441742.6
penicillin-binding protein 2ALQ73_03748Not AvailableNegative4964464 - 496635970187.3
ribosomal rna large subunit methyltransferase hALQ73_03749Not AvailableNegative4966388 - 496685517783.8
ribosomal silencing factor rsfsALQ73_03750Not AvailableNegative4966865 - 496725113928.5
putative nicotinate-nucleotide adenylyltransferaseALQ73_03751Not AvailableNegative4967312 - 496801925799.9
gamma-glutamyl phosphate reductaseALQ73_100003Not AvailableNegative4967994 - 496909739302.4
hypothetical proteinALQ73_102358Not AvailablePositive4968977 - 497002638673.1
putative 3-methyladenine dna glycosylaseALQ73_03752Not AvailablePositive4970141 - 497081825209.2
pap2 super protein/deda proteinALQ73_03753Not AvailablePositive4970822 - 497213847041.9

Displaying genes 4661 – 4670 of 5654 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial blight of soybeanCausesPMC2863448
Bacterial blightCausesPMC3029378

Displaying health effects 1 – 2 of 2 in total