Pseudomonas savastanoi pv. glycinea strain ICMP 4324

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. glycinea strain ICMP 4324 is a Gram-negative, rod-shaped bacterium exhibiting mobility due to the presence of flagella. This organism is classified as a heterotroph, relying on organic compounds as its energy source, and is an aerobe, necessitating oxygen for growth. The strain thrives optimally at a temperature of 28°C and is categorized as mesophilic, indicating its preference for moderate temperature conditions. This bacterium is known for its pathogenicity, particularly affecting important agricultural hosts such as Hordeum vulgare (barley), Glycine max (soybean), and Nicotiana tabacum (tobacco). It causes bacterial blight in soybean, a significant disease that can lead to substantial crop losses. Pseudomonas savastanoi pv. glycinea strain ICMP 4324 is characterized by a free-living biotic relationship, suggesting that it does not rely on a host organism for survival outside of its pathogenic interactions. The organism has a single replicon and is surrounded by two membranes, consistent with the characteristics of Gram-negative bacteria. The ecological implications of this strain are noteworthy, as its ability to infect multiple crop species highlights its potential impact on agricultural ecosystems. The presence of this pathogen in various habitats underscores the importance of monitoring and managing its spread to safeguard crop health and agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. glycinea strain ICMP 4324

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. glycinea strain ICMP 4324
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Hordeum vulgare, Glycine max, Nicotiana tabacum
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. glycinea strain ICMP 4324

Gene Summary

Adenine Count

1274445 bp

Thymine Count

1277040 bp

Guanine Count

1749946 bp

Cytosine Count

1750360 bp

Genome Length

6075658 bp

Protein-coding Genes

5547 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinALQ73_03628Not AvailablePositive25598 - 2608318159.5
gamma-aminobutyrate:proton symporter, aat familyALQ73_100792Not AvailableNegative26131 - 2755250646.9
hypothetical proteinALQ73_101117Not AvailableNegative27823 - 279665151.13
amino acid abc transporter, atp-binding proteinALQ73_03629Not AvailablePositive28048 - 2882128450.5
amino acid abc transporter, periplasmic amino acid-binding proteinALQ73_03630Not AvailablePositive28835 - 2959928077.5
amino acid abc transporter permeaseALQ73_03631Not AvailablePositive29666 - 3004913301.8
amino acid abc transporter permeaseALQ73_03632Not AvailablePositive30068 - 302868167.32
amino acid abc transporter, permease proteinALQ73_03633Not AvailablePositive30357 - 3104625561.2
hypothetical proteinALQ73_03634Not AvailablePositive31102 - 3231946078.9
hypothetical proteinALQ73_102617Not AvailablePositive32357 - 324914878.09

Displaying genes 111 – 120 of 5654 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial blight of soybeanCausesPMC2863448
Bacterial blightCausesPMC3029378

Displaying health effects 1 – 2 of 2 in total