Pseudomonas syringae pv. atrofaciens strain ICMP 5011

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain ICMP 5011 is a Gram-negative, rod-shaped bacterium that predominantly exists as single cells. This strain is classified as a heterotroph, indicating that it requires organic compounds for energy production. It thrives in various habitats, reflecting its adaptability to diverse environmental conditions. Additionally, P. syringae pv. atrofaciens strain ICMP 5011 is an aerobe, meaning it requires oxygen for survival and growth. The combination of these traits suggests that this strain may play a significant role in various ecosystems, potentially contributing to nutrient cycling and organic matter decomposition. Its broad habitat range indicates that it can inhabit different ecological niches, which may enhance its interactions within microbial communities. Understanding the ecological role of Pseudomonas syringae pv. atrofaciens strain ICMP 5011 in its natural environments could provide insights into its contributions to soil health and plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain ICMP 5011
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. atrofaciens strain ICMP 5011

Accession NumberRBOK00000000.1

Gene Summary

Adenine Count

1200076 bp

Thymine Count

1207138 bp

Guanine Count

1750587 bp

Cytosine Count

1735084 bp

Genome Length

5909507 bp

Protein-coding Genes

5003 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinALQ76_01809Not Available-1234567 - 12347887757.34
Luxr family transcriptional regulatorALQ76_01810Not Available+1237164 - 123756514624.3
Hypothetical proteinALQ76_01811Not Available+1237628 - 12378347424.89
Hypothetical proteinALQ76_01812Not Available+1238082 - 123846814172.1
hypothetical proteinALQ76_01813Not Available+1238468 - 123904321452.2
hypothetical proteinALQ76_01814Not Available+1239040 - 12393099911.71
Dna methyltransferaseALQ76_01815Not Available+1240170 - 124134243265.6
Hypothetical proteinALQ76_01816Not Available+1241396 - 124216028956.6
prophage psssm-02, orf7ALQ76_100552Not Available-1243616 - 12438529055.88
prophage psssm-02, orf6ALQ76_01817Not Available+1243952 - 12441888667.47

Displaying genes 11 – 20 of 5116 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites