Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail sheath protein | ALQ79_00886 | Not Available | Positive | 3554402 - 3555898 | 53196.1 |
| Tail tube protein | ALQ79_00887 | Not Available | Positive | 3555959 - 3556306 | 12454.8 |
| Putative tail protein | ALQ79_00888 | Not Available | Positive | 3556730 - 3558874 | 74671.4 |
| Tail/dna circulation protein | ALQ79_00889 | Not Available | Positive | 3558871 - 3560307 | 50579.0 |
| Tail protein | ALQ79_00890 | Not Available | Positive | 3560311 - 3561438 | 41205.7 |
| Putative base plate assembly protein | ALQ79_00891 | Not Available | Positive | 3561435 - 3561947 | 17910.5 |
| Putative tail protein | ALQ79_00892 | Not Available | Positive | 3561944 - 3562342 | 15198.9 |
| Tail protein | ALQ79_101337 | Not Available | Positive | 3562332 - 3563372 | 37011.8 |
| Putative phage-related tail fiber protein | ALQ79_00893 | Not Available | Positive | 3563970 - 3565430 | 51819.0 |
| Bacteriophage side tail fiber assembly factor & structural component | ALQ79_100512 | Not Available | Positive | 3565438 - 3566004 | 21001.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







